CDS

Accession Number TCMCG006C57177
gbkey CDS
Protein Id XP_013722899.2
Location complement(join(45311968..45312539,45312614..45314117))
Gene LOC106426707
GeneID 106426707
Organism Brassica napus

Protein

Length 691aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013867445.2
Definition pentatricopeptide repeat-containing protein At2g04860-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Pentatricopeptide repeat-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction R02108        [VIEW IN KEGG]
R02112        [VIEW IN KEGG]
R11262        [VIEW IN KEGG]
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01176        [VIEW IN KEGG]
EC 3.2.1.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00500        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko04973        [VIEW IN KEGG]
map00500        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map04973        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0031425        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1900865        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCGAATTAGCAAACCCATAACTCTTTTCACTAAAGACATTTCTTTCTACCATTCTCTCCTCAAGTCTTGTGTTCATGGTGATAACTCTTCTTCTCCACTCACAGTCTTTCGTGACTTACTTCGTTCCTCTCTCACACCAAACCATTTCACAATGTCCATCCTTCTCCAAGCTTCTTCTACCTCTATCGGTTCGTTGAAGTTAGTCCAAACCCATCTCAAGAAATCAGGCCTTGATCGTTTTGTATATGTGAAAACATCCCTTCTCGATCTCTACTTGAAGATGGGTTTTGTAGCGACCGCAGGCAACCTGTTCGACGAAATGCCTGAGAGAGACACCGTTGCTTGGAACGCAATGATCTGCGGGTATTCGCGCAATGGCTACGAGCGTGACGCGTGGCACCTCTTTATAGTAATGCTTCGACAAGGGTTTCTACCTTCCGCAACTACGCTTGCGAATTTGCTACCCTTTTGTGGACAATGCGGATTTGTTTCTCAAGGGAGGTCTGTTCATTGTATTGCTTCTAAGTCTGGCCTGGAGGTTGATTCTCAGGTCAAGAACGCGCTCATTTCGTTTTACTCAAAGTGTGCAGAGTTGGATTCAGCAGAGGTTTTGTTTACAGAGATGAAAGATAAAAGCACTGTTTCTTGGAATACGATGATCGGTGCTTATAGCCAGCGTGGTCTTCAGGAAGAGGCCATCGCTGTTTTCAAGAACATGTTGGAGATGAGCGTTGAGATTAGTCCGGTCACTGTTATTAATCTTCTTTCTGCTCATGTTAGTCACGAGCCGTTGCATAGTCTTGTTGTTAAAACTGGAATGGTGAATGATAACTCTGTGATTACTTCTTTGGTTTGTGCATATTCAAGGTGTGGGTGTTTGGATTCAGCAGAGCGTCTTTACGCATCTGCTGCTCAAGACAGTATCGTTGGTCTGACTTCGATTGTTTCAAGCTACGCCGAGAAAGGAGATATGGACTTAGTAATTGCTTATTTTTCTAAAATGCGACATCTGTGTATGAGAATCGATGCTGTCGCTTTGGTTGGGATTCTCCATGGATGTACAAACTCTTCCCACGTCGAGATTGGAACGTCGTTACATGGTTACGCGATTCAAAGCGGATTGTGCACACAAACGCTGGTTGTGAATGGACTTATAACAATGTACTCTAAGTTCGACGACATCGAGACCGTCCTGTTTTTGTTTGAGACACTGCACGAGACTCCTCTGATTAGCTGGAACTCAGTGATATCGGGGTGTGTACAGTCAGGAAGAGCGAGTACAGCCTTTGAGATCTTTCATCAGATGAGTTTAAGCGATGGACCTGTGCTTCCTGATGCTATCACCATATCGAGTTTACTTGCCGGCTGCTCCCAACTTTCGTGTTTGCATTTGGGGAAGACGCTTCATGGTTATATTCTTAGGAACAGTTTCGGAAACGAGAAGTTTGTTTGTACTGCTCTTATAGACATGTATGCTAAATGTGGAAACGCAGAGCTATCTGAAAGAGTGTTCAAGACCATTGATGCTCCGTGTACAGCAACGTGGAACTCGATGATATCAGGATACAGCTTATCAGGTTTGCAAAGCCGAGCTCTTTCTTGTTACTTGGAAATGAGAGAGCACGGATCGAAACCTGACAAGATCACCTTTCTGGGGGTTCTGTCCGCATGTACACACGGAGGTCTTGTCGATGAAGGGAGAGTATATTTCAGAGAAATGATCAAGGAGTTTGGGATGTCTCCAAGTTTACAGCATTATGCACTAATGGTTGGTTTGTTGGGTCGAGCTTGTTTGTTTAGTGAGGCGGTGAATTTGATTTGGGAGATGGATATGAAGGCGGATTCTGCAGTGTGGGGAGCTCTGCTTAGTGCTTGTATTGTGAACAGGGAGGTTGAGATGGGGGAATATGTAGCTAAGAAAATGTTTATGTTGGATTACAGGAACGGAGGGTTATATGTATTGATGTCAAACCTATATGCAACAGAAGAAATGTGGGACGATGTATCAAGGGTAAGGAGGATGATGAAAGATAATGGCTATGATGGTTACTTGGGAGTTAGTCAAACATTATAG
Protein:  
MRISKPITLFTKDISFYHSLLKSCVHGDNSSSPLTVFRDLLRSSLTPNHFTMSILLQASSTSIGSLKLVQTHLKKSGLDRFVYVKTSLLDLYLKMGFVATAGNLFDEMPERDTVAWNAMICGYSRNGYERDAWHLFIVMLRQGFLPSATTLANLLPFCGQCGFVSQGRSVHCIASKSGLEVDSQVKNALISFYSKCAELDSAEVLFTEMKDKSTVSWNTMIGAYSQRGLQEEAIAVFKNMLEMSVEISPVTVINLLSAHVSHEPLHSLVVKTGMVNDNSVITSLVCAYSRCGCLDSAERLYASAAQDSIVGLTSIVSSYAEKGDMDLVIAYFSKMRHLCMRIDAVALVGILHGCTNSSHVEIGTSLHGYAIQSGLCTQTLVVNGLITMYSKFDDIETVLFLFETLHETPLISWNSVISGCVQSGRASTAFEIFHQMSLSDGPVLPDAITISSLLAGCSQLSCLHLGKTLHGYILRNSFGNEKFVCTALIDMYAKCGNAELSERVFKTIDAPCTATWNSMISGYSLSGLQSRALSCYLEMREHGSKPDKITFLGVLSACTHGGLVDEGRVYFREMIKEFGMSPSLQHYALMVGLLGRACLFSEAVNLIWEMDMKADSAVWGALLSACIVNREVEMGEYVAKKMFMLDYRNGGLYVLMSNLYATEEMWDDVSRVRRMMKDNGYDGYLGVSQTL